Package: INetTool 0.1.1

INetTool: Integration Network

It constructs a Consensus Network which identifies the general information of all the layers and Specific Networks for each layer with the information present only in that layer and not in all the others.The method is described in Policastro et al. (2024) "INet for network integration" <doi:10.1007/s00180-024-01536-8>.

Authors:Valeria Policastro [aut, cre], Matteo Magnani [aut], Claudia Angelini [aut], Annamaria Carissimo [aut]

INetTool_0.1.1.tar.gz
INetTool_0.1.1.zip(r-4.7)INetTool_0.1.1.zip(r-4.6)INetTool_0.1.1.zip(r-4.5)
INetTool_0.1.1.tgz(r-4.6-any)INetTool_0.1.1.tgz(r-4.5-any)
INetTool_0.1.1.tar.gz(r-4.7-any)INetTool_0.1.1.tar.gz(r-4.6-any)
INetTool_0.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
INetTool/json (API)

# Install 'INetTool' in R:

install.packages('INetTool', repos = c('https://valeriapolicastro.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/valeriapolicastro/inet-tool/issues

Datasets:

adjL_data - Adjacency Data
exampleL_data - Example Data
graphL_data - Graph Data
tryL_data - Try Data

On CRAN:

4.00 score 1 stars 4 scripts 208 downloads 12 exports 162 dependencies

Last updated from:b39a69905e. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	219
source / vignettes	OK	329
linux-release-x86_64	OK	2082
macos-release-arm64	OK	195
macos-oldrel-arm64	OK	171
windows-devel	OK	157
windows-release	OK	2713
windows-oldrel	OK	140
wasm-release	OK	153

Exports:adj_rename consensusNet constructionGraph densityNet JWmatrix JWmean measuresNet plotC plotINet plotL specificNet thresholdNet

Dependencies:abind ash askpass backports base64enc bit bit64 bitops boot broom bslib cachem car carData cellranger class cli clipr cluster colorspace corrplot cowplot cpp11 crayon curl data.table data.tree Deriv DescTools deSolve digest doBy dotCall64 dplyr e1071 evaluate Exact expm farver fastmap fda fdatest fds FNN fontawesome forcats forecast Formula fracdiff fs generics ggplot2 ggpubr ggrepel ggsci ggsignif gld glue gridExtra gtable haven hdrcde highr hms htmltools htmlwidgets httr igraph isoband jquerylib jsonlite kernlab KernSmooth knitr ks labeling lattice lifecycle lme4 lmom lmtest locfit magrittr MASS Matrix MatrixModels mclust memoise mgcv microbenchmark mime minqa modelr multicool multinet mvtnorm networkD3 nlme nloptr nnet numDeriv openssl pbkrtest pcaPP perturbR pillar pkgconfig plyr polynom pracma prettyunits progress proxy purrr qpdf quantreg r2r R6 rainbow rappdirs rbibutils RColorBrewer Rcpp RcppArmadillo RcppEigen RCurl Rdpack readr readxl reformulas rematch reshape2 rlang rmarkdown robin rootSolve rstatix rstudioapi S7 sass scales spam SparseM stringi stringr survival sys tibble tidyr tidyselect timeDate tinytex tzdb urca utf8 vctrs viridisLite vroom withr xfun yaml zoo

INetTool for Network Integration

Rendered fromINetTool.Rmdusingknitr::rmarkdown

Last update: 2026-03-19
Started: 2026-03-19

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
adj_rename	adj_rename
Adjacency Data	adjL_data
consensusNet	consensusNet
constructionGraph	constructionGraph
densityNet	densityNet
Example Data	exampleL_data
Graph Data	graphL_data
JWmatrix	JWmatrix
JWmean	JWmean
measuresNet	measuresNet
plotC	plotC
plotINet	plotINet
plotL	plotL
specificNet	specificNet
thresholdNet	thresholdNet
try Data	tryL_data