{
  "_id": "6a1ef8beb401979e73417e3c",
  "Package": "INetTool",
  "Title": "Integration Network",
  "Version": "0.1.1",
  "Authors@R": "c(person(\"Valeria\", \"Policastro\", role=c(\"aut\", \"cre\"), email=\"valeria.policastro@gmail.com\",comment = c(ORCID = \"0000-0003-1016-460X\")),\nperson(\"Matteo\", \"Magnani\", role=c(\"aut\"), email=\"matteo.magnani@it.uu.se\"),\nperson(\"Claudia\", \"Angelini\", role=c(\"aut\"), email=\"c.angelini@na.iac.cnr.it\"),\nperson(\"Annamaria\", \"Carissimo\", role=c(\"aut\"), email=\"a.carissimo@na.iac.cnr.it\"))",
  "Maintainer": "Valeria Policastro <valeria.policastro@gmail.com>",
  "Description": "It constructs a Consensus Network which identifies the\ngeneral information of all the layers and Specific Networks for\neach layer with the information present only in that layer and\nnot in all the others.The method is described in Policastro et\nal. (2024) \"INet for network integration\"\n<doi:10.1007/s00180-024-01536-8>.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "VignetteBuilder": "knitr",
  "LazyData": "true",
  "Config/pak/sysreqs": "cmake libglpk-dev make libicu-dev libjpeg-dev\nlibuv1-dev libxml2-dev libssl-dev libx11-dev zlib1g-dev",
  "Repository": "https://valeriapolicastro.r-universe.dev",
  "Date/Publication": "2026-03-19 18:58:09 UTC",
  "RemoteUrl": "https://github.com/valeriapolicastro/inet-tool",
  "RemoteRef": "HEAD",
  "RemoteSha": "b39a69905eeeca878d42f501ca09f80d14b92f4b",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-19 05:59:37 UTC",
    "User": "root"
  },
  "Author": "Valeria Policastro [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-1016-460X>),\nMatteo Magnani [aut],\nClaudia Angelini [aut],\nAnnamaria Carissimo [aut]",
  "MD5sum": "8efed15cf1ca0d1de7372b6bbd556e83",
  "_user": "valeriapolicastro",
  "_type": "src",
  "_file": "INetTool_0.1.1.tar.gz",
  "_fileid": "0c11f6644702ac37e989998268435ca11045906de8c31ea21876d6f49d96a10e",
  "_filesize": 2836049,
  "_sha256": "0c11f6644702ac37e989998268435ca11045906de8c31ea21876d6f49d96a10e",
  "_created": "2026-05-19T05:59:37.000Z",
  "_published": "2026-06-02T15:37:34.375Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79109827173,
      "time": 235,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7076008527"
    },
    {
      "job": 79109826841,
      "time": 236,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7076008779"
    },
    {
      "job": 79109827396,
      "time": 197,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7075987676"
    },
    {
      "job": 79109827036,
      "time": 275,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7076007297"
    },
    {
      "job": 79109826546,
      "time": 341,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7075954819"
    },
    {
      "job": 79109826541,
      "time": 176,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7362489218"
    },
    {
      "job": 79109827958,
      "time": 206,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7076001793"
    },
    {
      "job": 79109827749,
      "time": 180,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7075995782"
    },
    {
      "job": 79109827152,
      "time": 166,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7075992534"
    }
  ],
  "_buildurl": "https://github.com/r-universe/valeriapolicastro/actions/runs/26079075093",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/valeriapolicastro/inet-tool",
  "_commit": {
    "id": "b39a69905eeeca878d42f501ca09f80d14b92f4b",
    "author": "ValeriaPolicastro <valeria.policastro@gmail.com>",
    "committer": "ValeriaPolicastro <valeria.policastro@gmail.com>",
    "message": "vignette update\n",
    "time": 1773946689
  },
  "_maintainer": {
    "name": "Valeria Policastro",
    "email": "valeria.policastro@gmail.com",
    "login": "valeriapolicastro",
    "description": "",
    "uuid": 44773104,
    "orcid": "0000-0003-1016-460X"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "igraph",
      "role": "Imports"
    },
    {
      "package": "r2r",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "ggpubr",
      "role": "Imports"
    },
    {
      "package": "multinet",
      "role": "Imports"
    },
    {
      "package": "robin",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "valeriapolicastro",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-25",
      "n": 15
    },
    {
      "week": "2026-12",
      "n": 1
    }
  ],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "valeriapolicastro",
      "count": 39,
      "uuid": 44773104
    }
  ],
  "_userbio": {
    "uuid": 44773104,
    "type": "user",
    "name": "Valeria Policastro"
  },
  "_downloads": {
    "count": 274,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/INetTool"
  },
  "_devurl": "https://github.com/valeriapolicastro/inet-tool",
  "_searchresults": 3,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/INetTool.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/valeriapolicastro/inet-tool",
  "_realowner": "valeriapolicastro",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.1",
      "date": "2025-06-19"
    },
    {
      "version": "0.1.2",
      "date": "2026-03-20"
    }
  ],
  "_exports": [
    "adj_rename",
    "consensusNet",
    "constructionGraph",
    "densityNet",
    "JWmatrix",
    "JWmean",
    "measuresNet",
    "plotC",
    "plotINet",
    "plotL",
    "specificNet",
    "thresholdNet"
  ],
  "_datasets": [
    {
      "name": "adjL_data",
      "title": "Adjacency Data",
      "object": "adjL_data",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "exampleL_data",
      "title": "Example Data",
      "object": "exampleL_data",
      "class": [
        "list"
      ],
      "fields": [],
      "table": true,
      "tojson": true
    },
    {
      "name": "graphL_data",
      "title": "Graph Data",
      "object": "graphL_data",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    },
    {
      "name": "tryL_data",
      "title": "try Data",
      "object": "tryL_data",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "adj_rename",
      "title": "adj_rename",
      "topics": [
        "adj_rename"
      ]
    },
    {
      "page": "adjL_data",
      "title": "Adjacency Data",
      "topics": [
        "adjL_data"
      ]
    },
    {
      "page": "consensusNet",
      "title": "consensusNet",
      "topics": [
        "consensusNet"
      ]
    },
    {
      "page": "constructionGraph",
      "title": "constructionGraph",
      "topics": [
        "constructionGraph"
      ]
    },
    {
      "page": "densityNet",
      "title": "densityNet",
      "topics": [
        "densityNet"
      ]
    },
    {
      "page": "exampleL_data",
      "title": "Example Data",
      "topics": [
        "exampleL_data"
      ]
    },
    {
      "page": "graphL_data",
      "title": "Graph Data",
      "topics": [
        "graphL_data"
      ]
    },
    {
      "page": "JWmatrix",
      "title": "JWmatrix",
      "topics": [
        "JWmatrix"
      ]
    },
    {
      "page": "JWmean",
      "title": "JWmean",
      "topics": [
        "JWmean"
      ]
    },
    {
      "page": "measuresNet",
      "title": "measuresNet",
      "topics": [
        "measuresNet"
      ]
    },
    {
      "page": "plotC",
      "title": "plotC",
      "topics": [
        "plotC"
      ]
    },
    {
      "page": "plotINet",
      "title": "plotINet",
      "topics": [
        "plotINet"
      ]
    },
    {
      "page": "plotL",
      "title": "plotL",
      "topics": [
        "plotL"
      ]
    },
    {
      "page": "SpecificNet",
      "title": "specificNet",
      "topics": [
        "specificNet"
      ]
    },
    {
      "page": "thresholdNet",
      "title": "thresholdNet",
      "topics": [
        "thresholdNet"
      ]
    },
    {
      "page": "tryL_data",
      "title": "try Data",
      "topics": [
        "tryL_data"
      ]
    }
  ],
  "_readme": "https://github.com/valeriapolicastro/inet-tool/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "ash",
    "askpass",
    "backports",
    "base64enc",
    "BH",
    "BiocParallel",
    "bit",
    "bit64",
    "bitops",
    "boot",
    "broom",
    "bslib",
    "cachem",
    "car",
    "carData",
    "cellranger",
    "class",
    "cli",
    "clipr",
    "cluster",
    "codetools",
    "colorspace",
    "corrplot",
    "cowplot",
    "cpp11",
    "crayon",
    "curl",
    "data.table",
    "data.tree",
    "Deriv",
    "DescTools",
    "deSolve",
    "digest",
    "doBy",
    "dotCall64",
    "dplyr",
    "e1071",
    "evaluate",
    "Exact",
    "expm",
    "farver",
    "fastmap",
    "fda",
    "fdatest",
    "fds",
    "FNN",
    "fontawesome",
    "forcats",
    "forecast",
    "formatR",
    "Formula",
    "fracdiff",
    "fs",
    "futile.logger",
    "futile.options",
    "generics",
    "ggplot2",
    "ggpubr",
    "ggrepel",
    "ggsci",
    "ggsignif",
    "gld",
    "glue",
    "gridExtra",
    "gtable",
    "haven",
    "hdrcde",
    "highr",
    "hms",
    "htmltools",
    "htmlwidgets",
    "httr",
    "igraph",
    "isoband",
    "jquerylib",
    "jsonlite",
    "kernlab",
    "KernSmooth",
    "knitr",
    "ks",
    "labeling",
    "lambda.r",
    "lattice",
    "lifecycle",
    "lme4",
    "lmom",
    "lmtest",
    "locfit",
    "magrittr",
    "MASS",
    "Matrix",
    "MatrixModels",
    "mclust",
    "memoise",
    "mgcv",
    "microbenchmark",
    "mime",
    "minqa",
    "modelr",
    "multicool",
    "multinet",
    "mvtnorm",
    "networkD3",
    "nlme",
    "nloptr",
    "nnet",
    "numDeriv",
    "openssl",
    "pbkrtest",
    "pcaPP",
    "perturbR",
    "pillar",
    "pkgconfig",
    "plyr",
    "polynom",
    "pracma",
    "prettyunits",
    "progress",
    "proxy",
    "purrr",
    "qpdf",
    "quantreg",
    "r2r",
    "R6",
    "rainbow",
    "rappdirs",
    "rbibutils",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
    "RCurl",
    "Rdpack",
    "readr",
    "readxl",
    "reformulas",
    "rematch",
    "reshape2",
    "rlang",
    "rmarkdown",
    "robin",
    "rootSolve",
    "rstatix",
    "rstudioapi",
    "S7",
    "sass",
    "scales",
    "snow",
    "spam",
    "SparseM",
    "stringi",
    "stringr",
    "survival",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "timeDate",
    "tinytex",
    "tzdb",
    "urca",
    "utf8",
    "vctrs",
    "viridisLite",
    "vroom",
    "withr",
    "xfun",
    "yaml",
    "zoo"
  ],
  "_vignettes": [
    {
      "source": "INetTool.Rmd",
      "filename": "INetTool.html",
      "title": "INetTool for Network Integration",
      "author": "Valeria Policastro et al.",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Installation of INetTool",
        "Example",
        "Constuction of the Networks",
        "1) Pre Analysis",
        "Networks measures",
        "Plot Networks",
        "2) Consensus Network:",
        "3) Case Specific Networks:",
        "4) INet Plot"
      ],
      "created": "2026-03-19 18:58:09",
      "modified": "2026-03-19 18:58:09",
      "commits": 1
    }
  ],
  "_score": 4,
  "_indexed": true,
  "_nocasepkg": "inettool",
  "_universes": [
    "valeriapolicastro"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-19T06:02:44.000Z",
      "distro": "noble",
      "commit": "b39a69905eeeca878d42f501ca09f80d14b92f4b",
      "fileid": "fc3d97980907b54c7d1cb1f31939970ae80906f99e2d69927b7a9d77d30d3a9b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/valeriapolicastro/actions/runs/26079075093"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.1",
      "date": "2026-05-19T06:02:48.000Z",
      "distro": "noble",
      "commit": "b39a69905eeeca878d42f501ca09f80d14b92f4b",
      "fileid": "49ca4d62aa84cd81f1d0da5df191f9cd4066e245610a51d7d538977e5ae025d4",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/valeriapolicastro/actions/runs/26079075093"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-19T06:01:45.000Z",
      "commit": "b39a69905eeeca878d42f501ca09f80d14b92f4b",
      "fileid": "e2e69c2a97cf58eeebd633e711d3a323cd3164a27481d78a6302e01270b09ab7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/valeriapolicastro/actions/runs/26079075093"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.1",
      "date": "2026-05-19T06:02:31.000Z",
      "commit": "b39a69905eeeca878d42f501ca09f80d14b92f4b",
      "fileid": "75485dc5efc629a495f84d17220fd98adac01515abd01cdc4a325a681f478a7b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/valeriapolicastro/actions/runs/26079075093"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-19T06:01:57.000Z",
      "commit": "b39a69905eeeca878d42f501ca09f80d14b92f4b",
      "fileid": "43a58a95908f9dfbefd259643a1a327279f78457663b21a5dd05e46858c278b9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/valeriapolicastro/actions/runs/26079075093"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-19T06:01:41.000Z",
      "commit": "b39a69905eeeca878d42f501ca09f80d14b92f4b",
      "fileid": "4a209a3a560cec72e4642c86f91c4030a13361603db2a26fa4ad1d5c80e91711",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/valeriapolicastro/actions/runs/26079075093"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.1",
      "date": "2026-05-19T06:01:17.000Z",
      "commit": "b39a69905eeeca878d42f501ca09f80d14b92f4b",
      "fileid": "3a41f6e3f95aed2d1657f7a5077fbf0aa1b71b018815dd89c10b2f864550bc26",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/valeriapolicastro/actions/runs/26079075093"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.1",
      "date": "2026-06-02T15:37:03.000Z",
      "commit": "b39a69905eeeca878d42f501ca09f80d14b92f4b",
      "fileid": "f9e62cc2df98349a229f461cad71e2ce28082389bd707e86617a477b8f464750",
      "status": "success",
      "buildurl": "https://github.com/r-universe/valeriapolicastro/actions/runs/26079075093"
    }
  ]
}